Molecular Dynamics Simulation

MD Simulation Animation 09.MD Simulation Analysis. This course covers molecular dynamics (MD) simulation using Desmond on Linux. It begins with preprocessing the data needed for simulation and continues with an introduction to molecular dynamics simulation animation and installation of CUDA Toolkit on Linux. It then covers animation animation 05-09 and MD Simulation Analysis. This course will prepare students to be able to accurately preprocess, perform, and analyze MD simulations of various solvents and systems.